BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E01LP1|AL425698
(737 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1658 1256 0.0
>3x_Contig1658
Length = 13395
Score = 1256 bits (628), Expect = 0.0
Identities = 683/708 (96%)
Strand = Plus / Minus
Query: 30 tacatcaccgtgctactggtttgcagmcgcataataatacaccatwttcattttgatcat 89
|||| ||||| ||| ||||||||||| |||||||||||||||||| |||| ||||||
Sbjct: 2044 tacagcaccgggctgctggtttgcagccgcataataatacaccattggcattgggatcat 1985
Query: 90 ccttttaggatwcggcaactgattttgtgccgggtactkgggcgggaattcttgtcccgt 149
||||| |||| |||||||||| || |||||||||||| |||||||||| ||||||||||
Sbjct: 1984 cctttgaggagacggcaactgagttggtgccgggtactggggcgggaatgcttgtcccgt 1925
Query: 150 atactgctgatgctcttcttgtgatttckgaagtacttgaaacgacgaattgaaattttc 209
|||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||
Sbjct: 1924 atactgctgatgctcttcttgtgattgcggaggtacttgaaacgacgaattgaaattttc 1865
Query: 210 gacccttcttgcatccttaacgctctggaattcttgtaacctgtctccaaatcktgactt 269
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1864 gacccttcttgcatccttaacgctctggaattcttgtaacctgtctccaaatcgtgactt 1805
Query: 270 ctttgcactatkccgcctgaactgaaactcgtcatctgtttcgaaactctgctgtgtaga 329
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 ctttgcactatgccgcctgaactgaaactcgtcatctgtttcgaaactctgctgtgtaga 1745
Query: 330 tcttttcctttccggtgtctccgttggaatcgttttcatctttaataccctcctcgaaka 389
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 1744 tcttttcctttccggtgtctccgttggaatcgtttgcatctttaataccctcctcgaaga 1685
Query: 390 agatatktcgccgcggggactctcagagccctgagtttccattcccttgtktgtcttgag 449
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1684 agatatgtcgccgcggggactctcagagccctgagtttccattcccttgtgtgtcttgag 1625
Query: 450 tcgctgtcttctggtctctagtatccgagatgaaaaaaaatactatattctaagcccatc 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tcgctgtcttctggtctctagtatccgagatgaaaaaaaatactatattctaagcccatc 1565
Query: 510 agcagctccaaataaaactgttatggctcgcttcacctgatcccaaccgattcacgataa 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 agcagctccaaataaaactgttatggctcgcttcacctgatcccaaccgattcacgataa 1505
Query: 570 gttgtggttcgtttaactttcagtgcttatgtttgtttatgtatccagtatatacattgt 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 gttgtggttcgtttaactttcagtgcttatgtttgtttatgtatccagtatatacattgt 1445
Query: 630 ttacagatttgaacgtcttcaatataacagaatgaatatcgttcacagtgattatcatta 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 ttacagatttgaacgtcttcaatataacagaatgaatatcgttcacagtgattatcatta 1385
Query: 690 cagacatacttcttgcaatgattagtagcgattagtgtccctgatggc 737
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 cagacatacttcttgcaatgattagtagcgattagtgtccctgatggc 1337
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,540
Number of Sequences: 1807
Number of extensions: 11540
Number of successful extensions: 402
Number of sequences better than 1.0e-20: 1
length of query: 737
length of database: 10,358,551
effective HSP length: 16
effective length of query: 721
effective length of database: 10,329,639
effective search space: 7447669719
effective search space used: 7447669719
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)